Flow Diagram

Data Processing
Data Processing

Preprocessing

Demultiplexing

Input: Fastq files

[Optional] Merging demultiplexed fastq files.

Alignment

Input: Target-Pair Fastq Files

Downstream Analysis

Peak Region

Peak Calling

Peak Annotation

Peak Region Read Counting

Whole Genome Read Counting

Biclustering Analysis

Fragment Decomposition

Create Signal Tracks

Differential Analysis

Annotation

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